Cheap flights from Tokyo to Nagasaki

One-way fares from ¥12,558 · TYO → NGS · prices found by travellers in the last 48 hours

Compare all dates Nagasaki → Tokyo
Cheapest fare
¥12,558

Japan Airlines · Tue, Nov 10

Cheapest month
November

from ¥12,558

Direct flights
Yes

Japan Airlines and Jetstar Japan

Flight time
1h 55m

960 km

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Cheapest month to fly from Tokyo to Nagasaki

Lowest one-way fare per person in each month. Choose a month to see every date.

  1. November 2026 Cheapest ¥12,558
  2. December 2026 ¥19,051
  3. February 2027 ¥14,133
  4. April 2027 ¥12,984
  5. July 2027 ¥15,444

Cheapest dates in November 2026

The lowest fares we've seen for each day, cheapest first.

Japan Airlines
Depart17:45 Tue, Nov 10HND → NGS 2h 05m · Direct
¥12,558one way, per person
View deal
Japan Airlines
Depart14:15 Wed, Nov 11HND → NGS 2h 00m · Direct
¥12,682one way, per person
View deal
Jetstar Japan
Depart07:10 Thu, Nov 26NRT → NGS 3h 05m · 1 stop
¥13,396one way, per person
View deal
Jetstar Japan
Depart07:10 Fri, Nov 6NRT → NGS 3h 00m · 1 stop
¥16,636one way, per person
View deal
Peach
Depart20:00 Sat, Nov 14NRT → NGS 3h 00m · 1 stop
¥19,962one way, per person
View deal
Jetstar Japan
Depart08:15 Sun, Nov 15NRT → NGS 2h 25m · Direct
¥20,069one way, per person
View deal
See every date in November 2026 →

Plan the rest of your trip to Nagasaki

Where to stay, what to do and getting around, from our travel partners.

Where to stay

Hotels in NagasakiCompare places to stay on Booking.com Find hotels →

Things to do

Things to do in NagasakiTours, attractions and day trips on Klook Explore →

Getting around

Airport transfer in NagasakiPre-book a driver to meet you at arrivals, with Kiwitaxi Book a transfer → Car hire in NagasakiCompare rental cars from major brands on EconomyBookings Compare cars →

About flights from Tokyo to Nagasaki

Tokyo (TYO) and Nagasaki (NGS) are about 960 km apart. Direct flights take around 1h 55m, and recent direct fares were with Japan Airlines and Jetstar Japan. Over the next few months, one-way fares start from ¥12,558, and November 2026 is currently the cheapest month to fly.

These prices come from searches travellers made in the last 48 hours, so they move quickly. If you see a good fare, it's worth booking soon. FlightsExp is free to use: you book directly with our travel partner.

Frequently asked questions

How much is a flight from Tokyo to Nagasaki?

The cheapest one-way fare we've seen recently is ¥12,558 with Japan Airlines, departing Tuesday, November 10, 2026. Over the coming months, the lowest fare in each month ranges from ¥12,558 to ¥19,051.

What is the cheapest month to fly from Tokyo to Nagasaki?

November 2026 currently has the lowest fares, from ¥12,558 one way.

Are there direct flights from Tokyo to Nagasaki?

Yes. Recent direct fares were with Japan Airlines and Jetstar Japan.

How long is the flight from Tokyo to Nagasaki?

A direct flight takes about 1h 55m. Tokyo and Nagasaki are around 960 km apart.

Which airlines fly from Tokyo to Nagasaki?

Recent fares on this route were with Japan Airlines, Jetstar Japan and Peach.

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